Package: evolved
Title: Open Software for Teaching Evolutionary Biology at Multiple
        Scales Through Virtual Inquiries
Version: 1.0.0
Authors@R: 
    c(person("Matheus", "Januario", email="januarioml.eco@gmail.com", role = c("aut", "cph", "cre"),
           comment = c(ORCID = "0000-0002-6480-7095")),
      person("Jennifer", "Auler", email="auler.jennifer@gmail.com", role = c("aut"),
           comment = c(ORCID = "0000-0001-7576-9058")),
      person("Andressa", "Viol", email="aviol@umich.edu", role = c("aut"),
      comment = c(ORCID = "0009-0004-2558-8389")),
      person("Daniel", "Rabosky", email="drabosky@umich.edu", role = c("aut"),
      comment = c(ORCID = "0000-0002-7499-8251"))
      )
Description: "Evolutionary Virtual Education" - 'evolved' - provides
        multiple tools to help educators (especially at the graduate
        level or in advanced undergraduate level courses) apply
        inquiry-based learning in general evolution classes. In
        particular, the tools provided include functions that simulate
        evolutionary processes (e.g., genetic drift, natural selection
        within a single locus) or concepts (e.g. Hardy-Weinberg
        equilibrium, phylogenetic distribution of traits). More than
        only simulating, the package also provides tools for students
        to analyze (e.g., measuring, testing, visualizing) datasets
        with characteristics that are common to many fields related to
        evolutionary biology. Importantly, the package is heavily
        oriented towards providing tools for inquiry-based learning -
        where students follow scientific practices to actively
        construct knowledge. For additional details, see package's
        vignettes.
License: GPL (>= 3)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Imports: ape, diversitree, phytools
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), LSD, paleobioDB,
        BAMMtools
Config/testthat/edition: 3
Depends: R (>= 2.10)
LazyData: true
VignetteBuilder: knitr
URL: https://github.com/mjanuario/evolved,
        https://mjanuario.github.io/evolved
BugReports: https://github.com/mjanuario/evolved/issues
Config/pak/sysreqs: libfftw3-dev libglpk-dev libgsl0-dev libxml2-dev
Repository: https://mjanuario.r-universe.dev
Date/Publication: 2026-04-01 15:55:15 UTC
RemoteUrl: https://github.com/mjanuario/evolved
RemoteRef: HEAD
RemoteSha: 300aa21549b1d12e567f5cc27d10c04bdb280513
NeedsCompilation: no
Packaged: 2026-10-01 09:24:19 UTC; root
Author: Matheus Januario [aut, cph, cre] (ORCID:
    <https://orcid.org/0000-0002-6480-7095>),
  Jennifer Auler [aut] (ORCID: <https://orcid.org/0000-0001-7576-9058>),
  Andressa Viol [aut] (ORCID: <https://orcid.org/0009-0004-2558-8389>),
  Daniel Rabosky [aut] (ORCID: <https://orcid.org/0000-0002-7499-8251>)
Maintainer: Matheus Januario <januarioml.eco@gmail.com>